Preserved child found in glass coffin under San Francisco home ID'd

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The little girl whose casket was found underneath a San Francisco home has been identified as Edith Howard Cook, who died October 13, 1876.

The story of a small glass, cast-iron casket began in the 1870's at San Francisco's Odd Fellows Cemetery.

About 140 years later - last May - the story came back. A construction crew at a home on Rossi Street near the University of San Francisco found the sealed casket.

Inside they found a little girl with long blonde hair, wearing a long white lace dress. She had a cross made of flowers on her chest and she was nicknamed Miranda Eve. Now we know that her real name is Edith Howard Cook.

Elissa Davey, a genealogist and founder of the Garden of Innocence Project, reburied the little girl in Colma last year. Davey says she was also determined to discover the real story of the girl, including the date of her death.

Through the use of DNA we now know the girl's identity and have tracked down a living relative.

Read Mike Mibach's full story here. 

The information below was compiled by the Garden of Innocence:

"Who was she?

Her name was Edith Howard Cook, the second born child and first born daughter of Horatio Nelson and Edith Scooffy Cook. She died on October 13, 1876, at age of two years, ten months and 15 days, and was buried in family plot in the Yerba Buena section of the Odd Fellows Cemetery on October 15, 1876.


Read more about the Cook family here. 

How did Edith die? 

Funeral home records indicate the cause of death was “Marasmus.” Marasmus was a term used in the
1800s for severe undernourishment, a condition which could have had a number of underlying causes, unknown or not fully understood at the time.

Given what is known today about late 1800s urban living, an infectious disease is the most likely cause of her marasmus. 

Read more about Edith's death here. 

How was Edith's coffin discovered? 

A contractor doing remodeling work on the residence of John and Ericka Karner in the Lone Mountain neighborhood of San Francisco uncovered the casket while excavating a section of their back yard. The Medical Examiner was notified and, after opening the casket, determined that further disposition of casket and the young girl inside was the responsibility of the Karners.

The casket was made of metal, 37 inches in length, with two viewing windows in the lid. It was tightly sealed, thus preserving the body of the young girl it held.

Read more about the discovery of Edith's coffin here. 

What happened after she was discovered?

Through the Office of the Public Administrator, the Karners were put in touch with Elissa Davey, founder of the Garden of Innocence, who arranged to take custody of the young girl. She then arranged for transportation and care of her in her original casket until reburial could be arranged. A new casket was built, into which the original casket was placed. The young girl, nicknamed “Miranda Eve,” was reburied at Greenlawn Memorial Park in Colma, CA, on June 4, 2016, at a service attended by about 140 people.

Another memorial will be held June 10th to honor Edith by holding a ceremony while knowing her true identity. Memorial Service To Be Held on June 10, 2017

Greenlawn Memorial Park, 1100 El Camino Real in Colma. The memorial service will begin at 11 a.m. It will be open to the public. Find more details on the ceremony's location here. 

How did she get the name Miranda Eve? 

The Public Administrator provided the name “Eve.” The Karner’s two young daughters chose the name “Miranda.”

How did Edith end up buried in the Karner's backyard? 

She was buried there - before it was a back yard, of course. All the residences in that neighborhood were built on the former site of a cemetery, owned and operated by the Independent Order of Odd Fellows. The cemetery accepted burials from 1865 until about 1902. The interred were exhumed in the early 1930s and transferred to Greenlawn Cemetery in Colma, CA. For unknown reasons, Edith/Miranda was left behind.

How was Miranda Eve ID'd as Edith Cook

The research effort was complex, consisting of four general phases which often overlapped. A successful
completion of each was needed to obtain a 100% positive identification.

Phase 1: Determining which part of the vacated cemetery corresponded to the Karner’s residence

A map or diagram of the cemetery as it existed when burials ceased was sought initially. None was found. A scalable plan for the development of the cemetery, dating to 1865, was discovered at the Bancroft Library at the University of California, Berkeley. Using that as a base, researchers initially identified two sections of the cemetery most likely corresponding to the location of the residence.

Subsequently, several historical maps, including original cemetery section drawings, were digitally layered atop one another and cross-referenced against photographs to reveal a clearer picture of which
family plots likely intersected with the location of the discovery.

Phase 2: Finding likely candidates for “Miranda Eve” buried in those sections who met certain criteria:

Examinations of “Miranda Eve” before reburial suggest a child aged two to four years at death. DNA preserved in her hair showed she was female. Coffin style indicates burial about 140 to 150 years ago. Any potential candidate had to qualify on all three counts. Surviving cemetery records and archived obituary notices, where available, were used to research these criteria.

In addition, she would have had to have been buried in a casket matching the one which was discovered. Confirmation of this information depended on finding surviving funeral home records.

Phase 3: Researching family histories of the most likely candidates to find potential descendants for possible DNA match 

Research on interments from the two cemetery sections narrowed the search to two highly likely candidates. Standard genealogical search methods were used to find and examine a large number of records for relevant information, most of which came from online sources of genealogical records.

This was a labor-intensive effort. More than a thousand hours of research was logged by three primary researchers (occasionally aided by additional volunteers) to complete this phase of the project.
Living family descendants were eventually found for both candidates.

Phase 4: Obtaining DNA samples from the descendants for comparison with DNA extracted from the same of hair taken from Miranda Eve 

Both descendants were contacted and agreed to provide DNA samples for comparison. One of these
showed a good match to DNA recovered from the hair of “Miranda Eve.

More about the use of DNA 

Strands of hair were obtained from “Miranda Eve” before her reburial for DNA testing. Analysis of nitrogen
isotopes, conducted at the University of California, Davis, revealed that she began experiencing
undernourishment approximately 3 months before her death.

This is consistent with a chronic illness (unlike, for example, smallpox or an accident where death was typically within weeks), and with the cause of death of “marasmus” indicated in funeral home records for Edith Howard Cook found later. Whatever the specific cause of her illness (a bacterial infection seems most likely), it is certain that “Miranda Eve” died from the “wasting” which was characteristic of a diagnosis of “marasmus.” Her hair was also analyzed for traces of medicines, such as morphine and cocaine, which were common components of
medicines in the late 1800s, but existence of those compounds could not be documented.

Analysis of nuclear DNA, which is inherited from both parents, confirmed that “Miranda Eve” was a girl (no
Y chromosome DNA fragments are present), and suggested ancestral origins in Western Europe. Her
complete mitochondrial DNA (inherited only maternally) was assembled, and it was found that “Miranda
Eve” carried the I1a1e haplotype, most common on the British Isles.

To obtain a certain identification of Edith H. Cook 

At the University of California, Santa Cruz, an analysis was performed comparing the DNA extracted from the hair sample with that obtained from the living male descendant of the second candidate, Edith Howard Cook. Those samples provided a clear match.

The living relative is Peter Cook, Edith’s grand-nephew. Peter Cook is a direct descendant of her older brother, Milton H. Cook. He lives in the Bay Area. DNA was extracted from the “Miranda Eve” hair samples in the clean room facilities at the university’s Paleogenomics lab using standard ancient DNA techniques. After sequencing, data was collected from about 10% of Miranda Eve’s genome.

The data show typical patterns of old or ancient DNA. The DNA fragments were short – about 50 basepairs each – and showed evidence of chemical degradation. The DNA sequence from Peter Cook was compared to the “Miranda Eve” data by examining the rate of matching at positions of rare DNA variants across the genome. Several long, contiguous sections were found where Peter Cook and “Miranda Eve” match at these rare genetic variations at a rate expected for two people who share a very recent common ancestor. The “Miranda Eve” data had no such matching segments to dozens of negative controls, i.e., DNA data from unrelated people. Further analysis of the matching regions confirmed that these segments are bona fide Identity By Descent regions – regions of the genome co-inherited from the same person, i.e., the parents of “Miranda Eve.”"